Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tnfrsf9P20334 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Gm12497-201ENSMUST00000138778 237 ntBASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Gm8655-201ENSMUST00000221159 852 ntBASIC12.48□□□□□ -0.41
Tnfrsf9P20334 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfrsf9P20334 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Gm15920-201ENSMUST00000118998 402 ntBASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfrsf9P20334 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfrsf9P20334 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfrsf9P20334 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.46□□□□□ -0.42
Tnfrsf9P20334 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC12.46□□□□□ -0.42
Tnfrsf9P20334 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfrsf9P20334 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfrsf9P20334 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfrsf9P20334 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfrsf9P20334 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Tnfrsf9P20334 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms