Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.42□□□□□ -0.26
Ccl3P10855 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.42□□□□□ -0.26
Ccl3P10855 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccl3P10855 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Gm13453-201ENSMUST00000118708 357 ntBASIC13.42□□□□□ -0.26
Ccl3P10855 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.42□□□□□ -0.26
Ccl3P10855 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccl3P10855 Mir8102-201ENSMUST00000184148 139 ntBASIC13.42□□□□□ -0.26
Ccl3P10855 Gm18049-201ENSMUST00000208909 581 ntBASIC13.42□□□□□ -0.26
Ccl3P10855 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.42□□□□□ -0.26
Ccl3P10855 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ccl3P10855 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccl3P10855 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccl3P10855 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccl3P10855 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccl3P10855 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.41□□□□□ -0.26
Ccl3P10855 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccl3P10855 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccl3P10855 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Gm13015-201ENSMUST00000118674 204 ntBASIC13.41□□□□□ -0.26
Ccl3P10855 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ccl3P10855 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccl3P10855 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccl3P10855 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.41□□□□□ -0.26
Ccl3P10855 Gm27920-201ENSMUST00000183953 96 ntBASIC13.41□□□□□ -0.26
Ccl3P10855 Gm29541-201ENSMUST00000191351 678 ntBASIC13.41□□□□□ -0.26
Ccl3P10855 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
Ccl3P10855 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ccl3P10855 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccl3P10855 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccl3P10855 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccl3P10855 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccl3P10855 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.4□□□□□ -0.26
Ccl3P10855 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.4□□□□□ -0.26
Ccl3P10855 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
Ccl3P10855 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.4□□□□□ -0.26
Ccl3P10855 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccl3P10855 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Ccl3P10855 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccl3P10855 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ccl3P10855 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Gm7292-201ENSMUST00000194706 2527 ntBASIC13.39□□□□□ -0.27
Ccl3P10855 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccl3P10855 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms