Protein–RNA interactions for Protein: P09925

Surf1, Surfeit locus protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf1P09925 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.23■□□□□ 0.35
Surf1P09925 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.23■□□□□ 0.35
Surf1P09925 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Surf1P09925 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.22■□□□□ 0.35
Surf1P09925 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Surf1P09925 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Gm7222-201ENSMUST00000117512 906 ntBASIC17.22■□□□□ 0.35
Surf1P09925 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Surf1P09925 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.22■□□□□ 0.35
Surf1P09925 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.22■□□□□ 0.35
Surf1P09925 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.22■□□□□ 0.35
Surf1P09925 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.22■□□□□ 0.35
Surf1P09925 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.22■□□□□ 0.35
Surf1P09925 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Surf1P09925 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC17.22■□□□□ 0.35
Surf1P09925 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Surf1P09925 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Surf1P09925 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Surf1P09925 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Surf1P09925 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Surf1P09925 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Surf1P09925 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.21■□□□□ 0.35
Surf1P09925 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.21■□□□□ 0.35
Surf1P09925 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.21■□□□□ 0.35
Surf1P09925 Gm6550-201ENSMUST00000187574 993 ntBASIC17.21■□□□□ 0.35
Surf1P09925 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.21■□□□□ 0.35
Surf1P09925 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.21■□□□□ 0.35
Surf1P09925 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Surf1P09925 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Surf1P09925 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Surf1P09925 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Surf1P09925 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Surf1P09925 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Surf1P09925 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Surf1P09925 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Surf1P09925 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Surf1P09925 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.2■□□□□ 0.34
Surf1P09925 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Gm27646-201ENSMUST00000183989 110 ntBASIC17.2■□□□□ 0.34
Surf1P09925 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
Surf1P09925 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
Surf1P09925 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Surf1P09925 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Surf1P09925 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Surf1P09925 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.2■□□□□ 0.34
Surf1P09925 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Surf1P09925 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Surf1P09925 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Surf1P09925 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.19■□□□□ 0.34
Surf1P09925 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Surf1P09925 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Surf1P09925 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Surf1P09925 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms