Protein–RNA interactions for Protein: P08553

Nefm, Neurofilament medium polypeptide, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NefmP08553 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC22.54■■□□□ 1.2
NefmP08553 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
NefmP08553 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NefmP08553 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
NefmP08553 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NefmP08553 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NefmP08553 Gm25745-201ENSMUST00000174945 133 ntBASIC22.53■■□□□ 1.2
NefmP08553 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NefmP08553 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NefmP08553 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NefmP08553 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NefmP08553 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NefmP08553 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC22.53■■□□□ 1.2
NefmP08553 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NefmP08553 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NefmP08553 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NefmP08553 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NefmP08553 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NefmP08553 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
NefmP08553 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Gm10605-202ENSMUST00000183019 3198 ntBASIC22.52■■□□□ 1.2
NefmP08553 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NefmP08553 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NefmP08553 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NefmP08553 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC22.52■■□□□ 1.2
NefmP08553 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC22.52■■□□□ 1.2
NefmP08553 Gm12497-201ENSMUST00000138778 237 ntBASIC22.52■■□□□ 1.2
NefmP08553 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NefmP08553 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NefmP08553 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NefmP08553 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC22.51■■□□□ 1.19
NefmP08553 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NefmP08553 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NefmP08553 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NefmP08553 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NefmP08553 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
NefmP08553 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC22.51■■□□□ 1.19
NefmP08553 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
NefmP08553 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC22.51■■□□□ 1.19
NefmP08553 Gm15165-201ENSMUST00000118140 502 ntBASIC22.51■■□□□ 1.19
NefmP08553 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
NefmP08553 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
NefmP08553 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
NefmP08553 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC22.51■■□□□ 1.19
NefmP08553 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC22.51■■□□□ 1.19
NefmP08553 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NefmP08553 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
NefmP08553 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
NefmP08553 Grk6-207ENSMUST00000225925 2769 ntBASIC22.51■■□□□ 1.19
NefmP08553 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NefmP08553 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NefmP08553 Celf4-206ENSMUST00000224553 1729 ntBASIC22.51■■□□□ 1.19
NefmP08553 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NefmP08553 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NefmP08553 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
NefmP08553 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NefmP08553 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NefmP08553 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NefmP08553 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
NefmP08553 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
NefmP08553 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.5■■□□□ 1.19
NefmP08553 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC22.5■■□□□ 1.19
NefmP08553 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
NefmP08553 Gm23634-201ENSMUST00000175071 91 ntBASIC22.5■■□□□ 1.19
NefmP08553 Gm27742-201ENSMUST00000184667 60 ntBASIC22.5■■□□□ 1.19
NefmP08553 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NefmP08553 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NefmP08553 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NefmP08553 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NefmP08553 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NefmP08553 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NefmP08553 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NefmP08553 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
NefmP08553 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NefmP08553 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
NefmP08553 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC22.49■■□□□ 1.19
NefmP08553 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
NefmP08553 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC22.49■■□□□ 1.19
NefmP08553 Gm4459-201ENSMUST00000118750 468 ntBASIC22.49■■□□□ 1.19
NefmP08553 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NefmP08553 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NefmP08553 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC22.49■■□□□ 1.19
NefmP08553 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms