Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
P06344 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
P06344 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
P06344 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
P06344 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.58□□□□□ -0.23
P06344 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
P06344 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.58□□□□□ -0.24
P06344 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
P06344 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
P06344 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.58□□□□□ -0.24
P06344 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Gm8318-201ENSMUST00000182954 872 ntBASIC13.58□□□□□ -0.24
P06344 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.58□□□□□ -0.24
P06344 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
P06344 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
P06344 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
P06344 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
P06344 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
P06344 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.57□□□□□ -0.24
P06344 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.57□□□□□ -0.24
P06344 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
P06344 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.57□□□□□ -0.24
P06344 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.57□□□□□ -0.24
P06344 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
P06344 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
P06344 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
P06344 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
P06344 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.56□□□□□ -0.24
P06344 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.56□□□□□ -0.24
P06344 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.56□□□□□ -0.24
P06344 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
P06344 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.56□□□□□ -0.24
P06344 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.56□□□□□ -0.24
P06344 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.56□□□□□ -0.24
P06344 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
P06344 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
P06344 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.55□□□□□ -0.24
P06344 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
P06344 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms