Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.42□□□□□ -0.26
P04224 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
P04224 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
P04224 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.42□□□□□ -0.26
P04224 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.42□□□□□ -0.26
P04224 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
P04224 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.42□□□□□ -0.26
P04224 Gm10566-201ENSMUST00000086739 996 ntBASIC13.42□□□□□ -0.26
P04224 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P04224 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P04224 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P04224 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.42□□□□□ -0.26
P04224 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P04224 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P04224 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P04224 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
P04224 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.42□□□□□ -0.26
P04224 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.42□□□□□ -0.26
P04224 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
P04224 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
P04224 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.41□□□□□ -0.26
P04224 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.41□□□□□ -0.26
P04224 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
P04224 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
P04224 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
P04224 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
P04224 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
P04224 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
P04224 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
P04224 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
P04224 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
P04224 Gm32996-201ENSMUST00000199828 1447 ntBASIC13.4□□□□□ -0.26
P04224 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
P04224 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
P04224 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
P04224 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
P04224 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
P04224 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
P04224 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
P04224 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.39□□□□□ -0.27
P04224 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
P04224 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
P04224 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.39□□□□□ -0.27
P04224 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
P04224 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.39□□□□□ -0.27
P04224 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.39□□□□□ -0.27
P04224 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.39□□□□□ -0.27
P04224 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.39□□□□□ -0.27
P04224 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
P04224 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms