Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa3P02831 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Hoxa3P02831 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa3P02831 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa3P02831 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa3P02831 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa3P02831 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Hoxa3P02831 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxa3P02831 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxa3P02831 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxa3P02831 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Hoxa3P02831 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxa3P02831 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Hoxa3P02831 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Hoxa3P02831 Gm27300-201ENSMUST00000184085 97 ntBASIC12.8□□□□□ -0.36
Hoxa3P02831 Gm27335-201ENSMUST00000184758 97 ntBASIC12.8□□□□□ -0.36
Hoxa3P02831 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Gm19164-201ENSMUST00000210667 640 ntBASIC12.8□□□□□ -0.36
Hoxa3P02831 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Hoxa3P02831 Gm10175-201ENSMUST00000086013 645 ntBASIC12.8□□□□□ -0.36
Hoxa3P02831 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Gm11873-201ENSMUST00000117877 1304 ntBASIC12.8□□□□□ -0.36
Hoxa3P02831 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxa3P02831 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hoxa3P02831 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Hoxa3P02831 Asic1-205ENSMUST00000228185 1818 ntBASIC12.79□□□□□ -0.36
Hoxa3P02831 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Hoxa3P02831 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxa3P02831 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.79□□□□□ -0.36
Hoxa3P02831 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxa3P02831 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.79□□□□□ -0.36
Hoxa3P02831 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.79□□□□□ -0.36
Hoxa3P02831 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.79□□□□□ -0.36
Hoxa3P02831 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 AC131709.1-201ENSMUST00000224731 1180 ntBASIC12.79□□□□□ -0.36
Hoxa3P02831 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Hoxa3P02831 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Hoxa3P02831 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.79□□□□□ -0.36
Hoxa3P02831 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa3P02831 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Hoxa3P02831 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa3P02831 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.78□□□□□ -0.36
Hoxa3P02831 Gm25911-201ENSMUST00000157621 56 ntBASIC12.78□□□□□ -0.36
Hoxa3P02831 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.78□□□□□ -0.36
Hoxa3P02831 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
Hoxa3P02831 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Hoxa3P02831 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms