Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
P01852 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01852 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01852 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01852 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
P01852 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.94□□□□□ -0.18
P01852 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
P01852 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
P01852 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.94□□□□□ -0.18
P01852 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.94□□□□□ -0.18
P01852 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.94□□□□□ -0.18
P01852 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.94□□□□□ -0.18
P01852 Gm18206-201ENSMUST00000207027 926 ntBASIC13.94□□□□□ -0.18
P01852 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.94□□□□□ -0.18
P01852 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.94□□□□□ -0.18
P01852 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
P01852 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
P01852 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
P01852 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.93□□□□□ -0.18
P01852 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
P01852 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.93□□□□□ -0.18
P01852 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.93□□□□□ -0.18
P01852 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.93□□□□□ -0.18
P01852 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.93□□□□□ -0.18
P01852 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Gm27628-201ENSMUST00000184911 107 ntBASIC13.93□□□□□ -0.18
P01852 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.93□□□□□ -0.18
P01852 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.93□□□□□ -0.18
P01852 Gm43514-201ENSMUST00000198852 424 ntBASIC13.93□□□□□ -0.18
P01852 Gm7787-201ENSMUST00000216858 688 ntBASIC13.93□□□□□ -0.18
P01852 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.93□□□□□ -0.18
P01852 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.93□□□□□ -0.18
P01852 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.93□□□□□ -0.18
P01852 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
P01852 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.93□□□□□ -0.18
P01852 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
P01852 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
P01852 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.93□□□□□ -0.18
P01852 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.92□□□□□ -0.18
P01852 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
P01852 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.92□□□□□ -0.18
P01852 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
P01852 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
P01852 Gm5253-201ENSMUST00000187104 1025 ntBASIC13.92□□□□□ -0.18
P01852 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC13.92□□□□□ -0.18
P01852 Gm9682-201ENSMUST00000197505 556 ntBASIC13.92□□□□□ -0.18
P01852 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.92□□□□□ -0.18
P01852 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.92□□□□□ -0.18
P01852 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.92□□□□□ -0.18
P01852 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms