Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
Igh-VJ558P01758 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Sybu-209ENSMUST00000228639 4113 ntBASIC13.17□□□□□ -0.3
Igh-VJ558P01758 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Igh-VJ558P01758 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Gm15173-201ENSMUST00000122049 433 ntBASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Igh-VJ558P01758 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Gm11452-201ENSMUST00000122376 690 ntBASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Igh-VJ558P01758 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms