Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.44■□□□□ 0.22
Vti1aO89116 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Vti1aO89116 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Vti1aO89116 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Vti1aO89116 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vti1aO89116 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Vti1aO89116 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.43■□□□□ 0.22
Vti1aO89116 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.43■□□□□ 0.22
Vti1aO89116 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.43■□□□□ 0.22
Vti1aO89116 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.43■□□□□ 0.22
Vti1aO89116 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 App-207ENSMUST00000227737 2827 ntBASIC16.43■□□□□ 0.22
Vti1aO89116 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Vti1aO89116 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Vti1aO89116 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.43■□□□□ 0.22
Vti1aO89116 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.42■□□□□ 0.22
Vti1aO89116 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Vti1aO89116 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Vti1aO89116 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.42■□□□□ 0.22
Vti1aO89116 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.42■□□□□ 0.22
Vti1aO89116 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.42■□□□□ 0.22
Vti1aO89116 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vti1aO89116 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vti1aO89116 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Vti1aO89116 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Vti1aO89116 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.41■□□□□ 0.22
Vti1aO89116 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Vti1aO89116 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.41■□□□□ 0.22
Vti1aO89116 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.41■□□□□ 0.22
Vti1aO89116 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.41■□□□□ 0.22
Vti1aO89116 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Vti1aO89116 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.41■□□□□ 0.22
Vti1aO89116 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.41■□□□□ 0.22
Vti1aO89116 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Vti1aO89116 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.41■□□□□ 0.22
Vti1aO89116 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vti1aO89116 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vti1aO89116 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vti1aO89116 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Gm15920-201ENSMUST00000118998 402 ntBASIC16.4■□□□□ 0.22
Vti1aO89116 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Auts2-212ENSMUST00000178555 309 ntBASIC16.4■□□□□ 0.22
Vti1aO89116 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.4■□□□□ 0.22
Vti1aO89116 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vti1aO89116 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vti1aO89116 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms