Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Gm43125-201ENSMUST00000201724 730 ntBASIC13.07□□□□□ -0.32
Cldn1O88551 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.07□□□□□ -0.32
Cldn1O88551 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.07□□□□□ -0.32
Cldn1O88551 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.07□□□□□ -0.32
Cldn1O88551 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Cldn1O88551 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cldn1O88551 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cldn1O88551 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Cldn1O88551 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cldn1O88551 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Cldn1O88551 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Cldn1O88551 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cldn1O88551 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cldn1O88551 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.06□□□□□ -0.32
Cldn1O88551 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.06□□□□□ -0.32
Cldn1O88551 Mir449b-201ENSMUST00000104833 80 ntBASIC13.06□□□□□ -0.32
Cldn1O88551 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.06□□□□□ -0.32
Cldn1O88551 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.06□□□□□ -0.32
Cldn1O88551 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Cldn1O88551 Gm20553-201ENSMUST00000204205 844 ntBASIC13.06□□□□□ -0.32
Cldn1O88551 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.06□□□□□ -0.32
Cldn1O88551 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.06□□□□□ -0.32
Cldn1O88551 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Cldn1O88551 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cldn1O88551 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cldn1O88551 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.05□□□□□ -0.32
Cldn1O88551 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Cldn1O88551 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.05□□□□□ -0.32
Cldn1O88551 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.05□□□□□ -0.32
Cldn1O88551 Rprl2-201ENSMUST00000157150 290 ntBASIC13.05□□□□□ -0.32
Cldn1O88551 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.05□□□□□ -0.32
Cldn1O88551 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.05□□□□□ -0.32
Cldn1O88551 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.05□□□□□ -0.32
Cldn1O88551 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Gm27622-201ENSMUST00000183779 60 ntBASIC13.05□□□□□ -0.32
Cldn1O88551 Mir6977-201ENSMUST00000184960 64 ntBASIC13.05□□□□□ -0.32
Cldn1O88551 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.05□□□□□ -0.32
Cldn1O88551 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.05□□□□□ -0.32
Cldn1O88551 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.05□□□□□ -0.32
Cldn1O88551 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.05□□□□□ -0.32
Cldn1O88551 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
Cldn1O88551 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cldn1O88551 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cldn1O88551 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cldn1O88551 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms