Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cops6O88545 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.56■□□□□ 0.56
Cops6O88545 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
Cops6O88545 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops6O88545 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops6O88545 Gm2810-201ENSMUST00000118681 990 ntBASIC18.56■□□□□ 0.56
Cops6O88545 Gm11543-201ENSMUST00000120758 370 ntBASIC18.56■□□□□ 0.56
Cops6O88545 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cops6O88545 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.56■□□□□ 0.56
Cops6O88545 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cops6O88545 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops6O88545 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cops6O88545 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cops6O88545 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cops6O88545 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Cops6O88545 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Cops6O88545 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Gm15593-201ENSMUST00000122085 1008 ntBASIC18.55■□□□□ 0.56
Cops6O88545 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Mir7023-201ENSMUST00000185093 64 ntBASIC18.55■□□□□ 0.56
Cops6O88545 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.55■□□□□ 0.56
Cops6O88545 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Cops6O88545 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cops6O88545 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.54■□□□□ 0.56
Cops6O88545 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC18.54■□□□□ 0.56
Cops6O88545 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.54■□□□□ 0.56
Cops6O88545 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC18.54■□□□□ 0.56
Cops6O88545 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cops6O88545 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cops6O88545 Dancr-204ENSMUST00000132389 2347 ntBASIC18.54■□□□□ 0.56
Cops6O88545 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops6O88545 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cops6O88545 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cops6O88545 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops6O88545 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops6O88545 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops6O88545 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC18.53■□□□□ 0.56
Cops6O88545 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cops6O88545 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC18.53■□□□□ 0.56
Cops6O88545 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cops6O88545 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops6O88545 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops6O88545 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC18.53■□□□□ 0.56
Cops6O88545 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops6O88545 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cops6O88545 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.52■□□□□ 0.56
Cops6O88545 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Gm18737-201ENSMUST00000173594 937 ntBASIC18.52■□□□□ 0.56
Cops6O88545 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.52■□□□□ 0.56
Cops6O88545 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cops6O88545 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cops6O88545 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cops6O88545 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cops6O88545 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Cops6O88545 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cops6O88545 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Cops6O88545 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cops6O88545 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.51■□□□□ 0.55
Cops6O88545 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cops6O88545 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Cops6O88545 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms