Protein–RNA interactions for Protein: O88508

Dnmt3a, DNA (cytosine-5)-methyltransferase 3A, mousemouse

Known RBP Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnmt3aO88508 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Dnmt3aO88508 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Gm12350-201ENSMUST00000121208 462 ntBASIC15.33■□□□□ 0.04
Dnmt3aO88508 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Gm5682-201ENSMUST00000173402 505 ntBASIC15.33■□□□□ 0.04
Dnmt3aO88508 Mir5126-201ENSMUST00000175513 77 ntBASIC15.33■□□□□ 0.04
Dnmt3aO88508 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.33■□□□□ 0.04
Dnmt3aO88508 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Dnmt3aO88508 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Gm11185-201ENSMUST00000117732 1007 ntBASIC15.32■□□□□ 0.04
Dnmt3aO88508 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.32■□□□□ 0.04
Dnmt3aO88508 Gm14722-201ENSMUST00000118943 689 ntBASIC15.32■□□□□ 0.04
Dnmt3aO88508 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Gm37153-201ENSMUST00000193637 231 ntBASIC15.32■□□□□ 0.04
Dnmt3aO88508 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.32■□□□□ 0.04
Dnmt3aO88508 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Gm15590-201ENSMUST00000078419 552 ntBASIC15.32■□□□□ 0.04
Dnmt3aO88508 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Dnmt3aO88508 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Gm11764-201ENSMUST00000120221 623 ntBASIC15.31■□□□□ 0.04
Dnmt3aO88508 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.31■□□□□ 0.04
Dnmt3aO88508 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.31■□□□□ 0.04
Dnmt3aO88508 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.31■□□□□ 0.04
Dnmt3aO88508 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.31■□□□□ 0.04
Dnmt3aO88508 Gm44771-201ENSMUST00000206975 626 ntBASIC15.31■□□□□ 0.04
Dnmt3aO88508 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.31■□□□□ 0.04
Dnmt3aO88508 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Dnmt3aO88508 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms