Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.37□□□□□ -0.59
Rpl35aO55142 Gm15358-201ENSMUST00000119249 520 ntBASIC11.37□□□□□ -0.59
Rpl35aO55142 Gm1401-201ENSMUST00000122048 772 ntBASIC11.37□□□□□ -0.59
Rpl35aO55142 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Rpl35aO55142 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.37□□□□□ -0.59
Rpl35aO55142 AW822252-206ENSMUST00000208904 237 ntBASIC11.37□□□□□ -0.59
Rpl35aO55142 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC11.37□□□□□ -0.59
Rpl35aO55142 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC11.37□□□□□ -0.59
Rpl35aO55142 Gm5364-201ENSMUST00000216789 889 ntBASIC11.37□□□□□ -0.59
Rpl35aO55142 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.37□□□□□ -0.59
Rpl35aO55142 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rpl35aO55142 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rpl35aO55142 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.37□□□□□ -0.59
Rpl35aO55142 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Rpl35aO55142 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rpl35aO55142 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Rpl35aO55142 App-207ENSMUST00000227737 2827 ntBASIC11.36□□□□□ -0.59
Rpl35aO55142 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Rpl35aO55142 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Rpl35aO55142 Prob1-201ENSMUST00000097619 3021 ntBASIC11.36□□□□□ -0.59
Rpl35aO55142 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rpl35aO55142 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpl35aO55142 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.36□□□□□ -0.59
Rpl35aO55142 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpl35aO55142 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.36□□□□□ -0.59
Rpl35aO55142 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpl35aO55142 Gm27628-201ENSMUST00000184911 107 ntBASIC11.36□□□□□ -0.59
Rpl35aO55142 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpl35aO55142 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpl35aO55142 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.36□□□□□ -0.59
Rpl35aO55142 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rpl35aO55142 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl35aO55142 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.35□□□□□ -0.59
Rpl35aO55142 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl35aO55142 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.35□□□□□ -0.59
Rpl35aO55142 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl35aO55142 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.35□□□□□ -0.59
Rpl35aO55142 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl35aO55142 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.35□□□□□ -0.59
Rpl35aO55142 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl35aO55142 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rpl35aO55142 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms