Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.73■□□□□ 0.27
Trdmt1O55055 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trdmt1O55055 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Trdmt1O55055 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC16.72■□□□□ 0.27
Trdmt1O55055 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Trdmt1O55055 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Trdmt1O55055 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Trdmt1O55055 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Trdmt1O55055 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.72■□□□□ 0.27
Trdmt1O55055 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Mir8102-201ENSMUST00000184148 139 ntBASIC16.72■□□□□ 0.27
Trdmt1O55055 Gm6888-201ENSMUST00000221983 706 ntBASIC16.72■□□□□ 0.27
Trdmt1O55055 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.72■□□□□ 0.27
Trdmt1O55055 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trdmt1O55055 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.72■□□□□ 0.27
Trdmt1O55055 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trdmt1O55055 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC16.71■□□□□ 0.27
Trdmt1O55055 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
Trdmt1O55055 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.71■□□□□ 0.27
Trdmt1O55055 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trdmt1O55055 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.71■□□□□ 0.27
Trdmt1O55055 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.71■□□□□ 0.27
Trdmt1O55055 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.71■□□□□ 0.27
Trdmt1O55055 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Trdmt1O55055 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.71■□□□□ 0.27
Trdmt1O55055 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Trdmt1O55055 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trdmt1O55055 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Trdmt1O55055 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Trdmt1O55055 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.71■□□□□ 0.26
Trdmt1O55055 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Gm23547-201ENSMUST00000158210 271 ntBASIC16.7■□□□□ 0.26
Trdmt1O55055 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Gm5866-201ENSMUST00000177881 973 ntBASIC16.7■□□□□ 0.26
Trdmt1O55055 Gm25144-201ENSMUST00000179561 110 ntBASIC16.7■□□□□ 0.26
Trdmt1O55055 Gm25352-201ENSMUST00000179815 110 ntBASIC16.7■□□□□ 0.26
Trdmt1O55055 Gm28630-201ENSMUST00000187806 498 ntBASIC16.7■□□□□ 0.26
Trdmt1O55055 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.7■□□□□ 0.26
Trdmt1O55055 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.7■□□□□ 0.26
Trdmt1O55055 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trdmt1O55055 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Trdmt1O55055 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms