Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 BC037039-201ENSMUST00000192003 2205 ntBASIC12.65□□□□□ -0.38
SncaO55042 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SncaO55042 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.64□□□□□ -0.39
SncaO55042 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
SncaO55042 Gm4609-201ENSMUST00000106443 1002 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm5138-201ENSMUST00000113842 1002 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm15191-201ENSMUST00000117933 1000 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm12182-201ENSMUST00000118655 1008 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm13882-201ENSMUST00000120886 1002 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm10284-201ENSMUST00000145057 1005 ntBASIC12.64□□□□□ -0.39
SncaO55042 Rprl3-201ENSMUST00000157400 290 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm10481-201ENSMUST00000179228 1002 ntBASIC12.64□□□□□ -0.39
SncaO55042 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
SncaO55042 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm2574-201ENSMUST00000181051 1002 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm3200-201ENSMUST00000181493 1002 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm8825-201ENSMUST00000182565 998 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm4518-201ENSMUST00000182638 718 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm8330-201ENSMUST00000182754 1008 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm4575-201ENSMUST00000182991 1002 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm8709-201ENSMUST00000183230 1012 ntBASIC12.64□□□□□ -0.39
SncaO55042 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm10293-201ENSMUST00000076317 1002 ntBASIC12.64□□□□□ -0.39
SncaO55042 Gm6316-201ENSMUST00000082064 1020 ntBASIC12.64□□□□□ -0.39
SncaO55042 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
SncaO55042 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SncaO55042 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SncaO55042 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SncaO55042 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
SncaO55042 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SncaO55042 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Gm29518-201ENSMUST00000190858 372 ntBASIC12.63□□□□□ -0.39
SncaO55042 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SncaO55042 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.63□□□□□ -0.39
SncaO55042 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
SncaO55042 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SncaO55042 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SncaO55042 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.62□□□□□ -0.39
SncaO55042 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.62□□□□□ -0.39
SncaO55042 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.62□□□□□ -0.39
SncaO55042 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SncaO55042 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms