Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap1O54991 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap1O54991 Gm5370-201ENSMUST00000187187 574 ntBASIC19.4■□□□□ 0.7
Cntnap1O54991 Gm7556-201ENSMUST00000201178 1084 ntBASIC19.4■□□□□ 0.7
Cntnap1O54991 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC19.4■□□□□ 0.7
Cntnap1O54991 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cntnap1O54991 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap1O54991 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap1O54991 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cntnap1O54991 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cntnap1O54991 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap1O54991 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap1O54991 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cntnap1O54991 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cntnap1O54991 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cntnap1O54991 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap1O54991 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap1O54991 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap1O54991 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap1O54991 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap1O54991 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC19.39■□□□□ 0.69
Cntnap1O54991 Mir7070-201ENSMUST00000183657 86 ntBASIC19.39■□□□□ 0.69
Cntnap1O54991 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap1O54991 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap1O54991 AC121804.3-201ENSMUST00000223420 295 ntBASIC19.39■□□□□ 0.69
Cntnap1O54991 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap1O54991 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap1O54991 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntnap1O54991 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cntnap1O54991 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cntnap1O54991 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cntnap1O54991 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap1O54991 AC166574.6-201ENSMUST00000227889 1806 ntBASIC19.38■□□□□ 0.69
Cntnap1O54991 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap1O54991 Dctn4-202ENSMUST00000223590 1530 ntBASIC19.38■□□□□ 0.69
Cntnap1O54991 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cntnap1O54991 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap1O54991 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Cntnap1O54991 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC19.38■□□□□ 0.69
Cntnap1O54991 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap1O54991 Gm43822-201ENSMUST00000200285 476 ntBASIC19.38■□□□□ 0.69
Cntnap1O54991 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap1O54991 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap1O54991 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap1O54991 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap1O54991 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap1O54991 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntnap1O54991 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.38■□□□□ 0.69
Cntnap1O54991 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.38■□□□□ 0.69
Cntnap1O54991 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Cntnap1O54991 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC19.37■□□□□ 0.69
Cntnap1O54991 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Cntnap1O54991 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Gm3961-201ENSMUST00000204425 994 ntBASIC19.37■□□□□ 0.69
Cntnap1O54991 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC19.37■□□□□ 0.69
Cntnap1O54991 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.37■□□□□ 0.69
Cntnap1O54991 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cntnap1O54991 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC19.37■□□□□ 0.69
Cntnap1O54991 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cntnap1O54991 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntnap1O54991 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC19.36■□□□□ 0.69
Cntnap1O54991 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cntnap1O54991 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Gm8565-201ENSMUST00000183259 1014 ntBASIC19.36■□□□□ 0.69
Cntnap1O54991 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC19.36■□□□□ 0.69
Cntnap1O54991 AC132317.1-201ENSMUST00000227227 962 ntBASIC19.36■□□□□ 0.69
Cntnap1O54991 Mettl6-204ENSMUST00000227595 1027 ntBASIC19.36■□□□□ 0.69
Cntnap1O54991 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cntnap1O54991 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cntnap1O54991 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntnap1O54991 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap1O54991 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap1O54991 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cntnap1O54991 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Cntnap1O54991 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cntnap1O54991 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC19.35■□□□□ 0.69
Cntnap1O54991 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC19.35■□□□□ 0.69
Cntnap1O54991 Gm27847-201ENSMUST00000183711 107 ntBASIC19.35■□□□□ 0.69
Cntnap1O54991 Gm27375-201ENSMUST00000183799 107 ntBASIC19.35■□□□□ 0.69
Cntnap1O54991 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms