Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.82□□□□□ -0.36
Ccr6O54689 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccr6O54689 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccr6O54689 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccr6O54689 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccr6O54689 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ccr6O54689 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccr6O54689 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccr6O54689 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccr6O54689 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.81□□□□□ -0.36
Ccr6O54689 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
Ccr6O54689 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccr6O54689 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.81□□□□□ -0.36
Ccr6O54689 Arhgef4-208ENSMUST00000211073 171 ntBASIC12.81□□□□□ -0.36
Ccr6O54689 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ccr6O54689 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccr6O54689 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccr6O54689 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.81□□□□□ -0.36
Ccr6O54689 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Ccr6O54689 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccr6O54689 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccr6O54689 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ccr6O54689 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccr6O54689 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccr6O54689 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Gm26039-201ENSMUST00000158152 144 ntBASIC12.8□□□□□ -0.36
Ccr6O54689 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.8□□□□□ -0.36
Ccr6O54689 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccr6O54689 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccr6O54689 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.8□□□□□ -0.36
Ccr6O54689 AC135637.1-201ENSMUST00000227750 365 ntBASIC12.8□□□□□ -0.36
Ccr6O54689 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Ccr6O54689 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccr6O54689 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.79□□□□□ -0.36
Ccr6O54689 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccr6O54689 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Ccr6O54689 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Ccr6O54689 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccr6O54689 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccr6O54689 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccr6O54689 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccr6O54689 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccr6O54689 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccr6O54689 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccr6O54689 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccr6O54689 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Ccr6O54689 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccr6O54689 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Ccr6O54689 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccr6O54689 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.79□□□□□ -0.36
Ccr6O54689 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.79□□□□□ -0.36
Ccr6O54689 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.79□□□□□ -0.36
Ccr6O54689 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccr6O54689 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Ccr6O54689 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.79□□□□□ -0.36
Ccr6O54689 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms