Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Per1O35973 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Per1O35973 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Per1O35973 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.48■□□□□ 0.23
Per1O35973 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.48■□□□□ 0.23
Per1O35973 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Per1O35973 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Per1O35973 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Per1O35973 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.48■□□□□ 0.23
Per1O35973 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Per1O35973 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Per1O35973 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Per1O35973 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.47■□□□□ 0.23
Per1O35973 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.47■□□□□ 0.23
Per1O35973 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Per1O35973 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Per1O35973 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Per1O35973 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.46■□□□□ 0.23
Per1O35973 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.46■□□□□ 0.23
Per1O35973 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.46■□□□□ 0.23
Per1O35973 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Per1O35973 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.46■□□□□ 0.23
Per1O35973 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Per1O35973 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Per1O35973 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.46■□□□□ 0.23
Per1O35973 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Per1O35973 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Per1O35973 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Per1O35973 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Per1O35973 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Per1O35973 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Per1O35973 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Per1O35973 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Per1O35973 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Per1O35973 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Per1O35973 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Per1O35973 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Gm13365-201ENSMUST00000121188 973 ntBASIC16.45■□□□□ 0.22
Per1O35973 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.45■□□□□ 0.22
Per1O35973 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.45■□□□□ 0.22
Per1O35973 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Per1O35973 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.45■□□□□ 0.22
Per1O35973 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC16.45■□□□□ 0.22
Per1O35973 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Per1O35973 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Per1O35973 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms