Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk3O35492 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk3O35492 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk3O35492 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk3O35492 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.54□□□□□ -0.08
Clk3O35492 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk3O35492 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clk3O35492 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Clk3O35492 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.54□□□□□ -0.08
Clk3O35492 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk3O35492 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Clk3O35492 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Clk3O35492 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.53□□□□□ -0.08
Clk3O35492 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Clk3O35492 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Clk3O35492 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.53□□□□□ -0.08
Clk3O35492 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.53□□□□□ -0.08
Clk3O35492 Gm25406-201ENSMUST00000157599 105 ntBASIC14.53□□□□□ -0.08
Clk3O35492 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.53□□□□□ -0.08
Clk3O35492 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.53□□□□□ -0.08
Clk3O35492 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.53□□□□□ -0.08
Clk3O35492 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.53□□□□□ -0.08
Clk3O35492 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Clk3O35492 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.52□□□□□ -0.08
Clk3O35492 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Clk3O35492 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.52□□□□□ -0.08
Clk3O35492 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Clk3O35492 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Clk3O35492 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Clk3O35492 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk3O35492 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Clk3O35492 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.52□□□□□ -0.09
Clk3O35492 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Clk3O35492 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.52□□□□□ -0.09
Clk3O35492 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk3O35492 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk3O35492 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk3O35492 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.52□□□□□ -0.09
Clk3O35492 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk3O35492 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Clk3O35492 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk3O35492 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk3O35492 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.52□□□□□ -0.09
Clk3O35492 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Clk3O35492 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Clk3O35492 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Clk3O35492 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Clk3O35492 Gm12644-201ENSMUST00000119935 606 ntBASIC14.51□□□□□ -0.09
Clk3O35492 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Gm6257-201ENSMUST00000163864 910 ntBASIC14.51□□□□□ -0.09
Clk3O35492 Gm25745-201ENSMUST00000174945 133 ntBASIC14.51□□□□□ -0.09
Clk3O35492 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Gm27867-201ENSMUST00000184778 125 ntBASIC14.51□□□□□ -0.09
Clk3O35492 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Clk3O35492 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms