Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC16.55■□□□□ 0.24
Clcn6O35454 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC16.55■□□□□ 0.24
Clcn6O35454 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
Clcn6O35454 Vmn1r210-201ENSMUST00000072044 921 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Clcn6O35454 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Clcn6O35454 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.55■□□□□ 0.24
Clcn6O35454 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.55■□□□□ 0.24
Clcn6O35454 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Clcn6O35454 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Clcn6O35454 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.54■□□□□ 0.24
Clcn6O35454 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.54■□□□□ 0.24
Clcn6O35454 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Gm10013-201ENSMUST00000106074 672 ntBASIC16.54■□□□□ 0.24
Clcn6O35454 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Clcn6O35454 Gm15933-201ENSMUST00000117215 616 ntBASIC16.54■□□□□ 0.24
Clcn6O35454 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC16.54■□□□□ 0.24
Clcn6O35454 Gm29516-201ENSMUST00000190402 468 ntBASIC16.54■□□□□ 0.24
Clcn6O35454 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.54■□□□□ 0.24
Clcn6O35454 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.54■□□□□ 0.24
Clcn6O35454 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Gm18032-201ENSMUST00000222541 538 ntBASIC16.54■□□□□ 0.24
Clcn6O35454 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 CT025579.2-201ENSMUST00000225280 816 ntBASIC16.54■□□□□ 0.24
Clcn6O35454 CT030194.1-201ENSMUST00000225507 532 ntBASIC16.54■□□□□ 0.24
Clcn6O35454 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Clcn6O35454 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.53■□□□□ 0.24
Clcn6O35454 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clcn6O35454 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.53■□□□□ 0.24
Clcn6O35454 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clcn6O35454 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.53■□□□□ 0.24
Clcn6O35454 Gm44897-201ENSMUST00000206187 1341 ntBASIC16.53■□□□□ 0.24
Clcn6O35454 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC16.53■□□□□ 0.24
Clcn6O35454 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.53■□□□□ 0.24
Clcn6O35454 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.53■□□□□ 0.24
Clcn6O35454 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.53■□□□□ 0.24
Clcn6O35454 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.53■□□□□ 0.24
Clcn6O35454 Gm37963-201ENSMUST00000195351 613 ntTSL 3 BASIC16.53■□□□□ 0.24
Clcn6O35454 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.53■□□□□ 0.24
Clcn6O35454 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Clcn6O35454 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Clcn6O35454 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.53■□□□□ 0.24
Clcn6O35454 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Clcn6O35454 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.53■□□□□ 0.24
Clcn6O35454 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Clcn6O35454 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Clcn6O35454 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Clcn6O35454 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Clcn6O35454 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms