Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Atf6bO35451 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Atf6bO35451 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.25□□□□□ -0.29
Atf6bO35451 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.25□□□□□ -0.29
Atf6bO35451 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.25□□□□□ -0.29
Atf6bO35451 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Atf6bO35451 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Atf6bO35451 Gm15173-201ENSMUST00000122049 433 ntBASIC13.25□□□□□ -0.29
Atf6bO35451 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.25□□□□□ -0.29
Atf6bO35451 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.25□□□□□ -0.29
Atf6bO35451 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.25□□□□□ -0.29
Atf6bO35451 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.25□□□□□ -0.29
Atf6bO35451 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Atf6bO35451 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Atf6bO35451 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Atf6bO35451 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atf6bO35451 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Atf6bO35451 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Atf6bO35451 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atf6bO35451 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.24□□□□□ -0.29
Atf6bO35451 Gm27646-201ENSMUST00000183989 110 ntBASIC13.24□□□□□ -0.29
Atf6bO35451 Gm19164-201ENSMUST00000210667 640 ntBASIC13.24□□□□□ -0.29
Atf6bO35451 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.24□□□□□ -0.29
Atf6bO35451 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.24□□□□□ -0.29
Atf6bO35451 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.24□□□□□ -0.29
Atf6bO35451 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Atf6bO35451 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Atf6bO35451 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Atf6bO35451 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Prob1-201ENSMUST00000097619 3021 ntBASIC13.23□□□□□ -0.29
Atf6bO35451 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.23□□□□□ -0.29
Atf6bO35451 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Gm3928-201ENSMUST00000121141 1307 ntBASIC13.23□□□□□ -0.29
Atf6bO35451 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.23□□□□□ -0.29
Atf6bO35451 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Atf6bO35451 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.23□□□□□ -0.29
Atf6bO35451 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.23□□□□□ -0.29
Atf6bO35451 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Atf6bO35451 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Atf6bO35451 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Atf6bO35451 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Atf6bO35451 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms