Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
Gfra3O35118 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Gfra3O35118 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.2□□□□□ -0.3
Gfra3O35118 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Gfra3O35118 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.19□□□□□ -0.3
Gfra3O35118 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gfra3O35118 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Gm13597-201ENSMUST00000121239 375 ntBASIC13.19□□□□□ -0.3
Gfra3O35118 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.19□□□□□ -0.3
Gfra3O35118 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Gm2213-201ENSMUST00000197485 688 ntBASIC13.19□□□□□ -0.3
Gfra3O35118 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Gfra3O35118 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.19□□□□□ -0.3
Gfra3O35118 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Gfra3O35118 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gfra3O35118 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.18□□□□□ -0.3
Gfra3O35118 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.18□□□□□ -0.3
Gfra3O35118 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Gfra3O35118 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gfra3O35118 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Gfra3O35118 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gfra3O35118 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gfra3O35118 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.18□□□□□ -0.3
Gfra3O35118 Gm4995-201ENSMUST00000117247 432 ntBASIC13.18□□□□□ -0.3
Gfra3O35118 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Gfra3O35118 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC13.18□□□□□ -0.3
Gfra3O35118 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.18□□□□□ -0.3
Gfra3O35118 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Mir3113-201ENSMUST00000175478 76 ntBASIC13.18□□□□□ -0.3
Gfra3O35118 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.18□□□□□ -0.3
Gfra3O35118 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Gfra3O35118 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.18□□□□□ -0.3
Gfra3O35118 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gfra3O35118 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra3O35118 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra3O35118 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra3O35118 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra3O35118 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.17□□□□□ -0.3
Gfra3O35118 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra3O35118 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra3O35118 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gfra3O35118 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms