Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf3O08791 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf3O08791 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Ebf3O08791 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf3O08791 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf3O08791 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf3O08791 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf3O08791 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf3O08791 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf3O08791 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Ebf3O08791 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
Ebf3O08791 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Ebf3O08791 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ebf3O08791 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ebf3O08791 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Ebf3O08791 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.83■□□□□ 0.13
Ebf3O08791 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Ebf3O08791 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.83■□□□□ 0.12
Ebf3O08791 Gm7063-201ENSMUST00000186840 981 ntBASIC15.83■□□□□ 0.12
Ebf3O08791 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.83■□□□□ 0.12
Ebf3O08791 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.83■□□□□ 0.12
Ebf3O08791 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Ebf3O08791 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.83■□□□□ 0.12
Ebf3O08791 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Ebf3O08791 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Ebf3O08791 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Ebf3O08791 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.83■□□□□ 0.12
Ebf3O08791 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC15.82■□□□□ 0.12
Ebf3O08791 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.82■□□□□ 0.12
Ebf3O08791 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.82■□□□□ 0.12
Ebf3O08791 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ebf3O08791 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Gm27494-201ENSMUST00000184735 189 ntBASIC15.82■□□□□ 0.12
Ebf3O08791 Gm45747-201ENSMUST00000212203 999 ntBASIC15.82■□□□□ 0.12
Ebf3O08791 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.82■□□□□ 0.12
Ebf3O08791 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.82■□□□□ 0.12
Ebf3O08791 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Gm8396-201ENSMUST00000057361 823 ntBASIC15.82■□□□□ 0.12
Ebf3O08791 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ebf3O08791 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ebf3O08791 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Ebf3O08791 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ebf3O08791 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Ebf3O08791 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ebf3O08791 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Ebf3O08791 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ebf3O08791 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC15.81■□□□□ 0.12
Ebf3O08791 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ebf3O08791 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.81■□□□□ 0.12
Ebf3O08791 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ebf3O08791 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.81■□□□□ 0.12
Ebf3O08791 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Ebf3O08791 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ebf3O08791 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms