Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.41■□□□□ 0.06
AlyrefO08583 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Gm8410-201ENSMUST00000117225 605 ntBASIC15.41■□□□□ 0.06
AlyrefO08583 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.41■□□□□ 0.06
AlyrefO08583 Gm12091-201ENSMUST00000146791 830 ntBASIC15.41■□□□□ 0.06
AlyrefO08583 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AlyrefO08583 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.41■□□□□ 0.06
AlyrefO08583 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
AlyrefO08583 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.41■□□□□ 0.06
AlyrefO08583 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AlyrefO08583 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
AlyrefO08583 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
AlyrefO08583 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
AlyrefO08583 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
AlyrefO08583 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
AlyrefO08583 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.4■□□□□ 0.06
AlyrefO08583 Gm17150-201ENSMUST00000165577 381 ntBASIC15.4■□□□□ 0.06
AlyrefO08583 Gm9682-201ENSMUST00000197505 556 ntBASIC15.4■□□□□ 0.06
AlyrefO08583 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AlyrefO08583 Gm7619-201ENSMUST00000210649 1282 ntBASIC15.4■□□□□ 0.06
AlyrefO08583 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
AlyrefO08583 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
AlyrefO08583 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.4■□□□□ 0.06
AlyrefO08583 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.4■□□□□ 0.06
AlyrefO08583 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.4■□□□□ 0.06
AlyrefO08583 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
AlyrefO08583 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
AlyrefO08583 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.39■□□□□ 0.05
AlyrefO08583 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.39■□□□□ 0.05
AlyrefO08583 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.39■□□□□ 0.05
AlyrefO08583 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC15.39■□□□□ 0.05
AlyrefO08583 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
AlyrefO08583 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.39■□□□□ 0.05
AlyrefO08583 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.39■□□□□ 0.05
AlyrefO08583 Gm6218-201ENSMUST00000219812 628 ntBASIC15.39■□□□□ 0.05
AlyrefO08583 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.39■□□□□ 0.05
AlyrefO08583 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC15.39■□□□□ 0.05
AlyrefO08583 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
AlyrefO08583 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
AlyrefO08583 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms