Protein–RNA interactions for Protein: J3QMK1

Sgo2b, Shugoshin 2B, mousemouse

Predictions only

Length 1,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgo2bJ3QMK1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Gm8318-201ENSMUST00000182954 872 ntBASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Sgo2bJ3QMK1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Gm13418-201ENSMUST00000119097 944 ntBASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Gm27459-201ENSMUST00000184860 107 ntBASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Sgo2bJ3QMK1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Gm43347-201ENSMUST00000200226 580 ntBASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Sgo2bJ3QMK1 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.21■□□□□ 0.02
Sgo2bJ3QMK1 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sgo2bJ3QMK1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Sgo2bJ3QMK1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sgo2bJ3QMK1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.21■□□□□ 0.02
Sgo2bJ3QMK1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sgo2bJ3QMK1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sgo2bJ3QMK1 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Sgo2bJ3QMK1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Sgo2bJ3QMK1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms