Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Colca2F8VPY8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Colca2F8VPY8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.34□□□□□ -0.11
Colca2F8VPY8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Mir7085-201ENSMUST00000184353 66 ntBASIC14.34□□□□□ -0.11
Colca2F8VPY8 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Colca2F8VPY8 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Colca2F8VPY8 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.33□□□□□ -0.11
Colca2F8VPY8 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm29310-201ENSMUST00000185468 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21825-201ENSMUST00000185728 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm29109-201ENSMUST00000185895 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21896-201ENSMUST00000186520 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21873-201ENSMUST00000186728 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21794-201ENSMUST00000187056 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21880-201ENSMUST00000187275 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21826-201ENSMUST00000187451 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21198-201ENSMUST00000188393 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21749-201ENSMUST00000189343 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21901-201ENSMUST00000189568 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm29424-201ENSMUST00000189716 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm28599-201ENSMUST00000189838 694 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21867-201ENSMUST00000189917 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm29269-201ENSMUST00000190087 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21722-201ENSMUST00000190153 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm28423-201ENSMUST00000190701 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21899-201ENSMUST00000190745 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21910-201ENSMUST00000191163 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21849-201ENSMUST00000191571 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm28678-201ENSMUST00000191593 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm20910-201ENSMUST00000193268 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm21871-201ENSMUST00000194621 696 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm18062-201ENSMUST00000208020 547 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Gm18055-201ENSMUST00000208254 547 ntBASIC14.33□□□□□ -0.12
Colca2F8VPY8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Colca2F8VPY8 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Gm8602-201ENSMUST00000184045 607 ntBASIC14.32□□□□□ -0.12
Colca2F8VPY8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Colca2F8VPY8 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.32□□□□□ -0.12
Colca2F8VPY8 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms