Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdh9F8VPK8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Gm8097-201ENSMUST00000117903 829 ntBASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Pcdh9F8VPK8 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Gm10819-201ENSMUST00000099988 561 ntBASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC15.62■□□□□ 0.09
Pcdh9F8VPK8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh9F8VPK8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh9F8VPK8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh9F8VPK8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh9F8VPK8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh9F8VPK8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh9F8VPK8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
Pcdh9F8VPK8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Pcdh9F8VPK8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh9F8VPK8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh9F8VPK8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms