Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Gm23634-201ENSMUST00000175071 91 ntBASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Gm6345-202ENSMUST00000180900 204 ntBASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdh1F7BJK1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 AA414768-201ENSMUST00000121924 1257 ntBASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Gm6659-201ENSMUST00000174752 547 ntBASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdh1F7BJK1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdh1F7BJK1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Pcdh1F7BJK1 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms