Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Syngap1F6SEU4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Syngap1F6SEU4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Syngap1F6SEU4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syngap1F6SEU4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.08■□□□□ 0.33
Syngap1F6SEU4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syngap1F6SEU4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Syngap1F6SEU4 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Gm7336-201ENSMUST00000107041 1232 ntBASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Gm27989-201ENSMUST00000184721 107 ntBASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Mir7036b-201ENSMUST00000184791 63 ntBASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Gm10253-201ENSMUST00000194270 940 ntBASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Syngap1F6SEU4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm22065-201ENSMUST00000103753 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm22066-201ENSMUST00000103761 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm24932-201ENSMUST00000103763 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm24115-201ENSMUST00000103799 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm22190-201ENSMUST00000103827 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm22191-201ENSMUST00000103831 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm24721-201ENSMUST00000103849 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm28018-201ENSMUST00000103869 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm26399-201ENSMUST00000103937 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm25349-201ENSMUST00000177728 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm23616-201ENSMUST00000177797 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm25871-201ENSMUST00000177816 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm24752-201ENSMUST00000178240 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm24496-201ENSMUST00000178287 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm25649-201ENSMUST00000178476 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm25548-201ENSMUST00000178681 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm23147-201ENSMUST00000178841 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm26095-201ENSMUST00000179270 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm22171-201ENSMUST00000179283 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm23936-201ENSMUST00000179354 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm22619-201ENSMUST00000179516 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm25255-201ENSMUST00000179579 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm24755-201ENSMUST00000179691 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm26506-201ENSMUST00000179692 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm25086-201ENSMUST00000179931 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm23243-201ENSMUST00000180047 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm24659-201ENSMUST00000180212 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm24169-201ENSMUST00000180244 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm23689-201ENSMUST00000180354 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm27359-201ENSMUST00000184153 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm27785-201ENSMUST00000184268 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm27466-201ENSMUST00000184396 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm27703-201ENSMUST00000184836 110 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Syngap1F6SEU4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Gm6257-201ENSMUST00000163864 910 ntBASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Gm27618-201ENSMUST00000183671 60 ntBASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC17.06■□□□□ 0.32
Syngap1F6SEU4 AC135669.1-201ENSMUST00000213585 412 ntBASIC17.06■□□□□ 0.32
Syngap1F6SEU4 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Syngap1F6SEU4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms