Protein–RNA interactions for Protein: F6RGA8

C530025M09Rik, RIKEN cDNA C530025M09 gene, mousemouse

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C530025M09RikF6RGA8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Rprl3-201ENSMUST00000157400 290 ntBASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Gm7286-201ENSMUST00000182691 1007 ntBASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Gm43509-201ENSMUST00000196551 2594 ntBASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
C530025M09RikF6RGA8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm8242-201ENSMUST00000193029 1420 ntBASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm38318-201ENSMUST00000195769 1706 ntBASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Gm18622-201ENSMUST00000219361 595 ntBASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC10.03□□□□□ -0.8
C530025M09RikF6RGA8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
C530025M09RikF6RGA8 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
C530025M09RikF6RGA8 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
C530025M09RikF6RGA8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
C530025M09RikF6RGA8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
C530025M09RikF6RGA8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
C530025M09RikF6RGA8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
C530025M09RikF6RGA8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
C530025M09RikF6RGA8 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.02□□□□□ -0.81
C530025M09RikF6RGA8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC10.02□□□□□ -0.81
C530025M09RikF6RGA8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms