Protein–RNA interactions for Protein: E9Q9Y3

Ccdc7b, Coiled-coil domain-containing 7B, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7bE9Q9Y3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc7bE9Q9Y3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm15165-201ENSMUST00000118140 502 ntBASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc7bE9Q9Y3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm7153-201ENSMUST00000117092 455 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm8825-201ENSMUST00000182565 998 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm4518-201ENSMUST00000182638 718 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc7bE9Q9Y3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc7bE9Q9Y3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms