Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.25■□□□□ 0.51
Ube4aE9Q735 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Gm9824-201ENSMUST00000178707 561 ntBASIC18.25■□□□□ 0.51
Ube4aE9Q735 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Gm27622-201ENSMUST00000183779 60 ntBASIC18.25■□□□□ 0.51
Ube4aE9Q735 Gm27920-201ENSMUST00000183953 96 ntBASIC18.25■□□□□ 0.51
Ube4aE9Q735 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ube4aE9Q735 Dancr-204ENSMUST00000132389 2347 ntBASIC18.24■□□□□ 0.51
Ube4aE9Q735 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.24■□□□□ 0.51
Ube4aE9Q735 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.24■□□□□ 0.51
Ube4aE9Q735 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ube4aE9Q735 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ube4aE9Q735 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Gm6415-201ENSMUST00000118488 348 ntBASIC18.22■□□□□ 0.51
Ube4aE9Q735 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.22■□□□□ 0.51
Ube4aE9Q735 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ube4aE9Q735 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC18.21■□□□□ 0.51
Ube4aE9Q735 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.21■□□□□ 0.51
Ube4aE9Q735 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.21■□□□□ 0.51
Ube4aE9Q735 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ube4aE9Q735 AC159621.2-201ENSMUST00000223519 1326 ntBASIC18.21■□□□□ 0.51
Ube4aE9Q735 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ube4aE9Q735 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Ube4aE9Q735 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms