Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Pcdhb9E9Q5G2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.89■□□□□ 0.46
Pcdhb9E9Q5G2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdhb9E9Q5G2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Gm15427-201ENSMUST00000117288 531 ntBASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Gm2213-201ENSMUST00000197485 688 ntBASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhb9E9Q5G2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhb9E9Q5G2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Gm24513-201ENSMUST00000174964 138 ntBASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Gm20553-201ENSMUST00000204205 844 ntBASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhb9E9Q5G2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Gm27397-201ENSMUST00000184997 107 ntBASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Gm2756-201ENSMUST00000195851 400 ntBASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Gm10154-201ENSMUST00000084445 354 ntBASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms