Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scaf11E9PZM7 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scaf11E9PZM7 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC21.02■□□□□ 0.96
Scaf11E9PZM7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Scaf11E9PZM7 Gm10766-202ENSMUST00000194123 606 ntBASIC21.02■□□□□ 0.96
Scaf11E9PZM7 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Scaf11E9PZM7 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC21.02■□□□□ 0.96
Scaf11E9PZM7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Scaf11E9PZM7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scaf11E9PZM7 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Scaf11E9PZM7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Scaf11E9PZM7 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Gm20628-201ENSMUST00000177363 3215 ntBASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Scaf11E9PZM7 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC21.01■□□□□ 0.95
Scaf11E9PZM7 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC21■□□□□ 0.95
Scaf11E9PZM7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Scaf11E9PZM7 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC21■□□□□ 0.95
Scaf11E9PZM7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Gm12960-201ENSMUST00000120017 1066 ntBASIC21■□□□□ 0.95
Scaf11E9PZM7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC21■□□□□ 0.95
Scaf11E9PZM7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Scaf11E9PZM7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Scaf11E9PZM7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.99■□□□□ 0.95
Scaf11E9PZM7 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Scaf11E9PZM7 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Gm9002-201ENSMUST00000178437 499 ntBASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Gm28760-201ENSMUST00000185995 736 ntBASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Gm31326-201ENSMUST00000191856 1048 ntBASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Gm7390-201ENSMUST00000212452 1216 ntBASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Scaf11E9PZM7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf11E9PZM7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf11E9PZM7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf11E9PZM7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Scaf11E9PZM7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms