Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Gm28043E0CXC2 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm28043E0CXC2 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm28043E0CXC2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm28043E0CXC2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Gm28043E0CXC2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Gm28043E0CXC2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gm28043E0CXC2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Gm28043E0CXC2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Gm28043E0CXC2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Gm15372-201ENSMUST00000120729 834 ntBASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Ank2-226ENSMUST00000189368 339 ntBASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Gm28043E0CXC2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Gm44454-201ENSMUST00000198541 138 ntBASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Gm18669-201ENSMUST00000216049 778 ntBASIC15.31■□□□□ 0.04
Gm28043E0CXC2 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.31■□□□□ 0.04
Gm28043E0CXC2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Gm28043E0CXC2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms