Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Gm17271-201ENSMUST00000165535 355 ntBASIC20.59■□□□□ 0.89
Tmf1B9EKI3 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tmf1B9EKI3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmf1B9EKI3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC20.59■□□□□ 0.89
Tmf1B9EKI3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tmf1B9EKI3 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Tmf1B9EKI3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmf1B9EKI3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Tmf1B9EKI3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tmf1B9EKI3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC20.58■□□□□ 0.89
Tmf1B9EKI3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC20.58■□□□□ 0.89
Tmf1B9EKI3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC20.58■□□□□ 0.89
Tmf1B9EKI3 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmf1B9EKI3 Gm4913-201ENSMUST00000117075 1290 ntBASIC20.58■□□□□ 0.89
Tmf1B9EKI3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.58■□□□□ 0.89
Tmf1B9EKI3 CT010506.4-201ENSMUST00000225457 351 ntBASIC20.58■□□□□ 0.89
Tmf1B9EKI3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmf1B9EKI3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tmf1B9EKI3 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC20.58■□□□□ 0.89
Tmf1B9EKI3 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Tmf1B9EKI3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmf1B9EKI3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmf1B9EKI3 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmf1B9EKI3 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmf1B9EKI3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmf1B9EKI3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tmf1B9EKI3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 BC037039-201ENSMUST00000192003 2205 ntBASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmf1B9EKI3 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Gm15427-201ENSMUST00000117288 531 ntBASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC20.56■□□□□ 0.88
Tmf1B9EKI3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 AC164567.1-201ENSMUST00000219185 960 ntBASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tmf1B9EKI3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Gm43767-201ENSMUST00000198933 381 ntBASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmf1B9EKI3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms