Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Gm6912-201ENSMUST00000117218 544 ntBASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Gm7820-201ENSMUST00000121012 1052 ntBASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Gm27989-201ENSMUST00000184721 107 ntBASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC19.43■□□□□ 0.7
Scn7aB1AYL1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Scn7aB1AYL1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Scn7aB1AYL1 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Gm9726-201ENSMUST00000180321 678 ntBASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.41■□□□□ 0.7
Scn7aB1AYL1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Gm5745-201ENSMUST00000183748 313 ntBASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Mir125a-201ENSMUST00000083545 68 ntBASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn7aB1AYL1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn7aB1AYL1 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn7aB1AYL1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC19.39■□□□□ 0.7
Scn7aB1AYL1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Syt7-205ENSMUST00000224135 1557 ntBASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Gm14042-201ENSMUST00000120139 833 ntBASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Gm12490-201ENSMUST00000120255 560 ntBASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Scn7aB1AYL1 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Gm4204-201ENSMUST00000110798 1231 ntBASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Mir1897-201ENSMUST00000122581 272 ntBASIC19.38■□□□□ 0.69
Scn7aB1AYL1 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Gm6944-201ENSMUST00000182449 1006 ntBASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scn7aB1AYL1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms