Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd3B1AR17 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd3B1AR17 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.9□□□□□ -0.02
Chd3B1AR17 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Chd3B1AR17 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd3B1AR17 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd3B1AR17 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd3B1AR17 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Chd3B1AR17 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chd3B1AR17 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chd3B1AR17 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Chd3B1AR17 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.89□□□□□ -0.03
Chd3B1AR17 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Gm43474-201ENSMUST00000196415 774 ntBASIC14.89□□□□□ -0.03
Chd3B1AR17 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Chd3B1AR17 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.89□□□□□ -0.03
Chd3B1AR17 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd3B1AR17 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Chd3B1AR17 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.88□□□□□ -0.03
Chd3B1AR17 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Chd3B1AR17 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
Chd3B1AR17 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Chd3B1AR17 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.88□□□□□ -0.03
Chd3B1AR17 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Chd3B1AR17 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Chd3B1AR17 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.88□□□□□ -0.03
Chd3B1AR17 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.88□□□□□ -0.03
Chd3B1AR17 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Chd3B1AR17 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd3B1AR17 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Chd3B1AR17 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.87□□□□□ -0.03
Chd3B1AR17 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.87□□□□□ -0.03
Chd3B1AR17 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Chd3B1AR17 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Chd3B1AR17 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Chd3B1AR17 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.87□□□□□ -0.03
Chd3B1AR17 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.87□□□□□ -0.03
Chd3B1AR17 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Chd3B1AR17 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Chd3B1AR17 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
Chd3B1AR17 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd3B1AR17 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms