Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a4A2AX52 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Gm11543-201ENSMUST00000120758 370 ntBASIC12.86□□□□□ -0.35
Col6a4A2AX52 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.86□□□□□ -0.35
Col6a4A2AX52 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col6a4A2AX52 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col6a4A2AX52 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.85□□□□□ -0.35
Col6a4A2AX52 AC130829.1-201ENSMUST00000221548 494 ntBASIC12.85□□□□□ -0.35
Col6a4A2AX52 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col6a4A2AX52 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Gm16198-201ENSMUST00000118766 670 ntBASIC12.84□□□□□ -0.35
Col6a4A2AX52 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.84□□□□□ -0.35
Col6a4A2AX52 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Col6a4A2AX52 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a4A2AX52 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a4A2AX52 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a4A2AX52 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Col6a4A2AX52 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms