Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.22■□□□□ 0.51
Cfap99A0A140LIX9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Gm44872-201ENSMUST00000207864 420 ntBASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cfap99A0A140LIX9 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.21■□□□□ 0.5
Cfap99A0A140LIX9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
Cfap99A0A140LIX9 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Gm8396-201ENSMUST00000057361 823 ntBASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cfap99A0A140LIX9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Asic1-205ENSMUST00000228185 1818 ntBASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Gm44492-201ENSMUST00000197012 141 ntBASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Sybu-209ENSMUST00000228639 4113 ntBASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cfap99A0A140LIX9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms