Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Trav13d-4A0A0G2JFX3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm8784-201ENSMUST00000222096 1435 ntBASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm18032-201ENSMUST00000222541 538 ntBASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm43598-201ENSMUST00000202482 2479 ntBASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm9768-201ENSMUST00000206007 2861 ntBASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm10013-201ENSMUST00000106074 672 ntBASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 AC125350.1-201ENSMUST00000225115 903 ntBASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm7367-201ENSMUST00000057611 492 ntBASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm11839-201ENSMUST00000120647 1953 ntBASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 AC153937.1-201ENSMUST00000218734 412 ntBASIC10.5□□□□□ -0.73
Trav13d-4A0A0G2JFX3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms