Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gm25287-201ENSMUST00000103846 110 ntBASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Gm22918-201ENSMUST00000103855 110 ntBASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Gm6973-201ENSMUST00000117080 721 ntBASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ighv1-42A0A0A6YY38 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.02□□□□□ -0.16
Ighv1-42A0A0A6YY38 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm22065-201ENSMUST00000103753 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm22066-201ENSMUST00000103761 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm24932-201ENSMUST00000103763 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm24115-201ENSMUST00000103799 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm22190-201ENSMUST00000103827 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm22191-201ENSMUST00000103831 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm24721-201ENSMUST00000103849 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm28018-201ENSMUST00000103869 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm26399-201ENSMUST00000103937 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Mir449b-201ENSMUST00000104833 80 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm18737-201ENSMUST00000173594 937 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm25349-201ENSMUST00000177728 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm23616-201ENSMUST00000177797 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm25871-201ENSMUST00000177816 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm24752-201ENSMUST00000178240 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm24496-201ENSMUST00000178287 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm25649-201ENSMUST00000178476 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm25548-201ENSMUST00000178681 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm23147-201ENSMUST00000178841 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm26095-201ENSMUST00000179270 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm22171-201ENSMUST00000179283 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm23936-201ENSMUST00000179354 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm22619-201ENSMUST00000179516 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm25255-201ENSMUST00000179579 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm24755-201ENSMUST00000179691 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm26506-201ENSMUST00000179692 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm25086-201ENSMUST00000179931 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm23243-201ENSMUST00000180047 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm24659-201ENSMUST00000180212 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm24169-201ENSMUST00000180244 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm23689-201ENSMUST00000180354 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm27359-201ENSMUST00000184153 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm27785-201ENSMUST00000184268 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm27466-201ENSMUST00000184396 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm27703-201ENSMUST00000184836 110 ntBASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ighv1-42A0A0A6YY38 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-42A0A0A6YY38 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-42A0A0A6YY38 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ighv1-42A0A0A6YY38 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms