Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm7506-201ENSMUST00000207758 815 ntBASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav21-dv12A0A075B6C4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm19164-201ENSMUST00000210667 640 ntBASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm18622-201ENSMUST00000219361 595 ntBASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav21-dv12A0A075B6C4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm4459-201ENSMUST00000118750 468 ntBASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm12497-201ENSMUST00000138778 237 ntBASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav21-dv12A0A075B6C4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms