Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 AC112142.1-201ENSMUST00000228796 918 ntBASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Trav13-4-dv7A0A075B6C2 Gm8668-201ENSMUST00000120559 1447 ntBASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm15565-201ENSMUST00000118890 427 ntBASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm6623-201ENSMUST00000173570 544 ntBASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm7367-201ENSMUST00000057611 492 ntBASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.52□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms