Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav7-4A0A075B6C1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Gm11336-201ENSMUST00000118168 334 ntBASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Trav7-4A0A075B6C1 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-4A0A075B6C1 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-4A0A075B6C1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.55
Trav7-4A0A075B6C1 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-4A0A075B6C1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-4A0A075B6C1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav7-4A0A075B6C1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav7-4A0A075B6C1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Gm23547-201ENSMUST00000158210 271 ntBASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav7-4A0A075B6C1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms