Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6-5A0A075B6B5 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Gm12441-201ENSMUST00000121806 588 ntBASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6-5A0A075B6B5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6-5A0A075B6B5 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms