Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm15165-201ENSMUST00000118140 502 ntBASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 AC164629.2-201ENSMUST00000217916 270 ntBASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm37305-201ENSMUST00000195714 4279 ntBASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm18195-201ENSMUST00000207604 706 ntBASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav6d-7A0A075B6B0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms