Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcb1Q9Z0H3 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Gm13365-201ENSMUST00000121188 973 ntBASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Gm11745-201ENSMUST00000121669 448 ntBASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Gm16026-204ENSMUST00000162652 683 ntBASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Gm18057-201ENSMUST00000208220 503 ntBASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Smarcb1Q9Z0H3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Gm18737-201ENSMUST00000173594 937 ntBASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Gm18889-201ENSMUST00000174284 929 ntBASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Gm5312-201ENSMUST00000203728 547 ntBASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcb1Q9Z0H3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Mir6990-201ENSMUST00000183724 91 ntBASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Smarcb1Q9Z0H3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Smarcb1Q9Z0H3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcb1Q9Z0H3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcb1Q9Z0H3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Smarcb1Q9Z0H3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Smarcb1Q9Z0H3 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.77■□□□□ 0.11
Smarcb1Q9Z0H3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Gm44335-201ENSMUST00000196879 141 ntBASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Gm44297-201ENSMUST00000198304 141 ntBASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Gm44346-201ENSMUST00000198851 141 ntBASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Smarcb1Q9Z0H3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms