Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Lhx6Q9R1R0 Gm42479-201ENSMUST00000198654 1356 ntBASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Gm13059-201ENSMUST00000119881 398 ntBASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 AC153529.1-201ENSMUST00000217818 370 ntBASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Lhx6Q9R1R0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Gm17540-201ENSMUST00000181617 1528 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Gm13255-201ENSMUST00000117255 547 ntBASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Tprkb-202ENSMUST00000089570 1216 ntTSL 5 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Lhx6Q9R1R0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Gm22175-201ENSMUST00000175007 78 ntBASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms